Essel Program - 2002 Annual Report


ANNUAL REPORT OF THE ESSEL NEUROSCIENCE PROGRAM AT WILLIAMS COLLEGE, 10th Year
July 2001 thru June 2002

The Neuroscience Program:

Sixteen seniors matriculated in the senior seminar to complete the Neuroscience concentration. Enrollment in Introduction to Neuroscience was 51. Additionally, undergraduate research opportunities continued to thrive. Three senior class Essel fellows completed honors theses in Neuroscience, and one other Essel fellow completed a molecular biology thesis this year. The accomplishments of our students and faculty in this 10th year of the Essel Neuroscience program are described below.

I. Undergraduate Research Fellows:

Thirteen undergraduate students were able to pursue Neuroscience research at Williams during the summer of 2001. They were able to engage in hands-on research for 10 weeks while working closely with a Neuroscience professor. The summer research projects and continued interests and accomplishments of these students are listed in Appendix I. Titles and abstracts of Essel supported theses by these students can be found in Appendix II.

II. Williams Faculty:

The accomplishments of the Neuroscience faculty are published every year in the Annual Report of Science at Williams. This year we have included a summary of their work in Appendix IV as well, though you can view the complete report on the Williams web page at www.williams.edu/go/sciencecenter/center/RS02html/RepSci2002-Contents.html. A listing of faculty publications that were supported in part by Essel funds can be found in Appendix III. Appendix V provides a listing of all other current faculty grants and corresponding projects.

III. Neuroscience Courses:

The faculty continues to provide a wide range of courses that covered a variety of disciplines within the field of Neuroscience and which offer students an outstanding opportunity to develop ideas and conduct empirical research. Appendix VIII provides a listing of the Neuroscience courses, the syllabi of new Neuroscience courses and a brief description of the student-generated research that occurred in each.

IV. Research Technicians:

Dr. Noah Sandstrom, who received his Ph.D. in Psychology from Duke University in May of 1999, continued his duties as part- time Senior Neuroscience Technician for his 3rd year. He simultaneously continued lecturing for the Psychology department and has been offered, and accepted, a position as an assistant professor of Psychology at Williams. Although he will no longer be an Essel fellow, he will fortunately be able to continue his valued research and teaching for the Neuroscience Program for many years to come.

This year, in addition to continuing his own research, teaching, attending conferences and giving invited talks, Noah served as a senior honors thesis advisor for two Neuroscience concentrators. Though only one of these students was able to complete the work, the other still gained a great deal of research experience and hopes to pursue a career in biomedical sciences.
Throughout his last year as an Essel fellow, Junior Neuroscience Technician Matthew Beverly assisted Noah. Matt will also be leaving Williams College to work towards a Masters degree from Northeastern University in Biomedical Engineering. During his year here, in addition to the lab preparation work required for the Jr. Essel fellow, Matt worked in Steve Zottoli's lab recording tadpole response latency to dragonfly attack stimulus. This line of research is helping to set groundwork for an improved understanding of neuronal actions in the tadpole. A class of '02 graduate, Laurel Bifano, will be this year's Jr. Essel fellow.

V. Colloquium Speakers:

The Neuroscience faculty was successful in bringing significantly more interesting Essel funded speakers on campus this year. A complete listing of these speakers and their topics can be found in Appendix VI.

VI. Williams College Program for Undergraduates at the Marine Biological Laboratory at Woods Hole.

Student Participants:

David Arnolds '04
Nikiah Asamoah '04
Carolyn Chevez '02
Shakira Fuller '03
Nicholas Hiza '02
Jennifer Nierman '02
Luis Taboada '02

Dr. Steve Zottoli continued to direct the Williams College Program for undergraduate studies at Woods Hole. Additional funding for the program was provided by Howard Hughes Medical Institute and Nan and Howard Schow.


APPENDIX I: 2001 ESSEL NEUROSCIENCE FELLOWS

Student: Walter Chen ('01)
Advisor: Heather Williams
Project: Song Perception in Female Zebra Finches. Determined that females do not seem to discriminate between songs with or without repeated notes when the syllables were identical.
Currently: Unknown

Student: Abigail Davidson ('03)
Advisor: Betty Zimmerberg
Project: Tested the effect that periodic maternal isolations in
early life would have on the vocalizations during play in rats
Currently: Senior at Williams. Doing research as an Essel fellow again this summer with plans to do a thesis on vocalizations during juvenile play in different strains of rats which are bred to have varying rates of vocalizations.

Student: Sarah Hart ('02)
Advisor: Noah Sandstrom
Project: Long term effects of maternal separation on spatial memory in rats
Currently: Attending the MD/Ph.D. program at Duke University Medical School

Student: Nicholas Hiza ('02)
Advisor: Steve Zottoli
Project: Summer: Dye Coupling Evidence for Gap Junctions Between Supramedullary/Dorsal Neurons of the Cunner, Tautogolabrus adspersus
Currently: Working for Williams trying to determine the efficacy of using windmills as an alternative "cleaner" source of energy for the college.

Student: Annie Im ('01)
Advisor: Paul Solomon
Project: Two Neuropsychological testing projects: one working on a Alzheimer's Disease (AD) screening tool for caregivers; the other examining the how scores have changed over time for the MMSE test in order to evaluate patient awareness and early testing patterns
Currently: A Research Assistant for Dr. Solomon working on several AD and neurology clinical studies at the Memory Clinic in Bennington and planning on going to medical school.

Student: Brian Kelly ('02)
Advisor: Noah Sandstrom
Project: Summer 2001: "Estrogenic Modulation of Time Perception." How estrogen levels effect "internal clocks", potentially useful in understanding estrogen dopamine interactions
2001-2002 project: "Effects of the Cannabanoid Agonist, WIN 55,212-2, on Timing Behavior in Rats"
Currently: Working as an OR prep technician at Albany Medical Center. Plans to go to medical school.

Student: James Nick Lafave ('02)
Advisor: Heather Williams
Project: Identifying poylymorphic microsatellite sequences of DNA in the House Finch. These will be used to create a mathematical model of relatedness that will provide greater insight into song learning processes.
Currently: Continuing research with microsatellite DNA in Heather Williams Lab

Student: Natalie Marchant ('01)
Advisor: Paul Solomon
Project: Screening and Performing Neuropsychological Evaluations of Possible Dementia Patients
Currently: Working as a Research Assistant in a Veteran's hospital in San Diego, California doing AD research.

Student: Jennifer Nierman ('02)
Advisor: Steve Zottoli
Project: Summer 01: Coordinator Williams College- HHMI Woods- Morphology of the spinomedullary neurons of the Cunner. They used dye coupling to determine whether SMN cells may be electrotonically coupled.
Currently: Working in the lab of Dr. Lori Flanagan-Cato in the Psychology Department of the University of Pennsylvania

Student: Abigail Rosenthal ('02)
Advisor: Betty Zimmerberg
Project: Differential Maternal Behavior Following Social Isolation. She attempted to determine why, dams show preference for previously isolated pups.
Currently: Working as a Research Assistant studying impulsivity and decision making in a rat model of substance abuse at Oregon Health and Science University in Portland, Oregon.

Student: Melody Samuels ('02)
Advisor: Betty Zimmerberg
Project: Responses of Rats Selectively Bred for Infantultrasonic Vocalizations to Allopregnanalone. They found similar effects of allopregnanalone in normal and selectively bred animals, suggesting that this is not the site responsible for USVs.
Currently: Working as a Research Assistant in Psychoneuroimmunology for Professor Elliot Friedman at Williams.

Student: Caitlin Stashwick ('02)
Advisor: Paul Solomon
Project: New Patient Psychological Testing at the Memory Clinic in Bennington. Assessing effects of increased awareness on early diagnosis of AD.
Currently: Working as a Research Assistant at the Dana Farber Cancer Institute in Boston for 2 years, then plans to go to medical school.

Student: Yang Wang ('01)
Advisor: Elizabeth Adler
Project: Calcium Compartmentalization in AChE Regulation in PC12 cells
Currently: Attending medical school at University of Pennsylvania


APPENDIX II: ABSTRACTS OF NEUROSCIENCE HONORS THESIS

Electrotonic Coupling of Supramedullary Neurons in Tautogolabrus adspersus

Nicholas Hiza

Supramedullary neurons (SMNs) are a group of neurons found in the central nervous system of many species of teleost fish. Electrophysiological exploration of the supramedullary neurons in the cunner (Tautogolabrus adspersus) suggests the cells are electrotonically coupled through gap junctions. To test this theory, a cell soma was injected with a fluorescent dye, Lucifer Yellow (521.56 MW), and neighboring somata were screened for dye coupling. Dye was observed in neighboring cells in 6 of 28 preparations. This strongly supports the hypothesis that the SMNs in this species are interconnected through gap junctions. The morphological arrangement and projection patterns of the SMNs indicate that these interconnections exist in the median dorsal fissure, possibly on neurites found projecting rostrally and caudally off the soma. Multiple fine processes were found branching off the main process of the cell. These processes have not been observed previously. Their targets are unknown, and they indicate this system may be more complex then initial expected. Finally, asymmetry in dye flow and patterns in the number of cells filled indicates that cells may exist in strongly coupled subgroups of between three and four cells. These subgroups are separated from one another by wider intersomatic intervals, and may serve as a bridge-point for information crossing the midline.


Maternal Separation Leads to Changes in Learning and Memory in Adulthood: Interactions with Chronic Adult Stress

Sarah Hart

Adverse early experiences have long-term effects on brain morphology and function, stress responsivity, and behavior. In rats, maternal separation during early postnatal life affects both brain and behavior, though results vary with the use of different experimental paradigms. Maternal separation causes a decrease in negative feedback signals of the HPA axis, leading to higher basal corticosterone levels and increased sensitivity to stressful stimuli in adult life. The adult hippocampus is particularly vulnerable to chronically elevated corticosterone levels, exhibiting both morphological and functional changes. Therefore, this study investigates the effects of maternal separation on performance on a hippocampally dependent task, the 12-arm radial arm maze (RAM). Rats were removed from their home cage for six hours daily during e third postnatal week. As adults, these maternally separated (MS) animals demonstrated long-term impairment in both working and reference spatial memory on the RAM compared to non-maternally separated controls (NMS). Additionally, after 24 days of either daily restraint or control conditions, MS rats showed poor retention of the maze task compared to NMS rats. However, restraint itself was not associated with changes in performance. Furthermore, MS and NMS rats performed at comparable levels by the end of testing. These results support the growing body of research describing the detrimental effects of adverse early experiences on cognitive function in adulthood, especially on tasks mediated by the hippocampus.

The Role of the Mauthner Cell Homologs in C-Start Recovery After Spinal Cord Injury

Jennifer Nierman

The Mauthner cells (M-cells), a pair of large, identifiable neurons in the goldfishhindbrain, are known to be involved in the initiation of the fast startle response (C-start). Two additional pairs of neurons in the hindbrain, MiD2cm and MiD3cm, are also thought to be involved in the generation of C-starts. Due to their morphological and probable functional homology to the M-cell, I refer to these cells as the M-cell homologs.
After spinal cord injury at the spinomedullary level (SML), adult goldfish initially lose the ability to display the fast startle response (C-start). Over time, however, some fish are capable of recovering the response. Although the neuronal circuitry of this recovered response is currently unknown, previous studies suggest that the M-cell is not involved. My hypothesis, then, is that the M-cell homologs initiate the recovered C-start response.
The aim of this study was to test whether the M-cell homologs regenerate across the wound after spinal cord injury. Goldfish that had displayed normal startle behavior were given spinal cord crushes at the SML. After a postoperative interval of 5 or 6 months, fish were categorized depending on their extent of recovery. The spinal cords of goldfish that recovered both equilibrium, and equilibrium and the C-start response were back-filled with Dextran biotin at a level caudal to the wound. The brains were then sectioned and analyzed. Cells filled in the brain corresponded to the neurons whose axons had regenerated across the wound.
Recovery of C-start behavior did not depend on regeneration of the M-cells as the M-cells regenerated in only 2 of the 4 fish that recovered C-start behavior. In contrast, the homologs regenerated in all 4 cases. Thus, the results confirm that the M-cells are not required for recovery of the C-start and also suggest that the M-cell homologs may be involved in the recovered response.


APPENDIX III: ESSEL SUPPORTED PUBLICATIONS AND PRESENTATIONS
*Designates Williams College student


Noah Sandstrom

Invited Talks
"Hormonal Modulation of Learning and Memory". Department of Psychology, Gustavus Adolphus College, St. Peter, Mn.

"Hormones and the Brain: Influences on Learning and Memory" Department of Psychology, DePauw University, Greencastle, In.

Posters
Sandstrom, N.J. & *Hart, S.R. (2002). Social isolation during development leads to
memory deficits in adulthood. Poster presented at the Society for Behavioral Neuroendocrinology Conference, University of Massachusettes, Amherst, MA.

*Hart, S.R. & Sandstrom, N.J. (2002). Maternal separation of rats during the third postnatal week leads to deficits in working and reference memory in adulthood. Poster presented at the New England Undergraduate Research on Neuroscience (N.E.U.R.O.N.) Conference, Wellesley College, Wellesley, MA.

*Kelly, B.A. & Sandstrom, N.J. (2001). Effects of the cannabinoid agonist, WIN 55,212-
2 on interval timing behavior in rats. Poster presented at the New England Undergraduate Research on Neuroscience (N.E.U.R.O.N.) Conference, Wellesley College, Wellesley, MA.

*Kelly, B.A., *Hart, S.R., & Sandstrom, N.J. (2001). Estrogenic modulation of time
perception. Poster presented at the University of Massachusetts Neuroendocrine Studies Symposium, Amherst, MA.

Sandstrom, N.J. (2001). Isolation of rats during the third postnatal week leads to memory
deficits in adulthood. Poster presented at the Society for Neuroscience Conference, San Diego, CA.

Paul Solomon

Publications
Solomon, P.R. (2001). Model systems and memory: Applications and extensions of clinical neuroscience. in: J.E. Steinmetz, M.A. Gluck, & P.R. Solomon (Eds.) Model systems and the neurobiology of associative learning. New Jersey: Lawrence E.Erlbaum Associates. pp. 111-148.

Steinmetz, J.E., Gluck, M.A., & Solomon, P.R (Eds.) (2001). Model Systems in Neurobiology of Associative Learning: A Festschrift in Honor of Richard F.Thompson. New Jersey; Lawrence E. Erlbaum Associates.

Invited Talks
"Diagnosis and Treatment of Alzheimer's Disease." A Symposium Presented at Neurology Teaching Day, Saratoga Springs, NY.

"Future and Current Treatments for Alzheimer's Disease." Grand Rounds for the Department of Psychiatry, Southwestern Vermont Medical Center, Bennington, VT.

"Recruitment for Clinical Trials in Alzheimer's Disease: the 7 Minute Screen." Presentation at Fujisawa Research Institute of America, Investigators Meeting, Chicago, IL.

"Single-Blind comparison of Galantamine and Donepezil: Attntion, Concentration and Electrocortical activity. Presentation for the Janssen Nicotine Advisory Board, Salt Lake City, UT.

"Recent Developments in the Diagnosis and Treatment of Alzheimer's Disease." Grand Rounds at Albany Medical College, Albany, NY.


Heather Williams

Publications
Williams, H. (2001). Choreography of song, dance, and beak movements in the zebra finch (Taeniopygia guttata). Journal of Experimental Biology. 204, 3497-3506.

Invited Talks
“Coordination of Song and Dance in Zebra Finch Courtship.” Presented at the Sixth Annual Bird Song Workshop at The Rockefeller University Field Research Center, Milford, NY. *Victor Platt '02 and Chuck Munyon '00.


Betty Zimmerberg

Publications
*Frisone, D. F. '00, Frye, C. A., & Zimmerberg, B. (2002 ). Social isolation stress during the third week of life has age-dependent effects of spatial learning in rats. Behavioural Brain Research, 128, 153-160.

Invited Talks
"Undergraduate Neuroscience Education: from the enchanted loom to the world wide web." (June, 2001) Presented at the Project Kaleidoscope Workshop; Multi media Neuroscience Education Project. Trinity College, Hartford, Ct.

"Neurosteroids and the Maternal Separation Paradigm. (November, 2001) Invited colloquium in the Department of Psychiatry & Behavioral Sciences at the Emory University School of Medicine, Atlanta, GA.

"Using a model of early neonatal stress to elucidate patterns of altered brain development". (April, 2002) Department of Experimental Biology, University of Cagliari, Cagliari, Italy.

"Pandering or Pedagogy: Using multimedia to teach Neuroscience". Workshop presented at the New England Undergraduate Research on Neuroscience (N.E.U.R.O.N.) conference, Wellesley College, Wellesley, MA.

Posters
* M.L. Samuels '02, S.M. Joseph, H.M., Rojowsky, A.L., * Davidson '02, & S.A. Brunelli, Zimmerberg, B. (2001) "Responses of rats selectively bred for infant ultrasonic vocalizations (USVs) to allopregnanalone B". Presented at the annual meeting of the International Society for Developmental Psychobiology in San Diego, CA.


APPENDIX IV: NEUROSCIENCE FACULTY ACCOMPLISHMENTS

Professor Elizabeth Adler

This year, Elizabeth Adler continued her research on PC12 cells with the assistance of two students, Yang Wang, '01, and Caitlin Stashwick '02. Last summer, Yang focused on how Acetylcholinesterase is regulated by neuronal activity and movements of calcium in the cell. Caitlin continued Yang's research in the fall and they co-authored a poster that was presented at the Society for Neuroscience meeting in San Diego last fall. Professor Adler left Williams at the conclusion of this year for a position at Science On-Line.

Professor Heather Williams

Professor Williams taught a new class this fall, entitled Sensory Biology. The class examined the relationship between energy in the environment and behavior of the animal. Students learned how energy from the environment can be transduced into signals that can be interpreted by the body to regulate a resultant behavior. The description and syllabus of this class can be found in Appendix VIII. In addition to this course, Professor Williams taught a traditional Neuroscience class on Animal Behavior. This class included independent research by the students and real field studies of animals in the wild. Throughout the year, Professor Williams reviewed manuscripts for journals and served as a reviewer for the National Science Foundation's Course, Curriculum, and Laboratory Improvement Program.
In addition to all of this, Professor Williams continued working with students in her lab investigating questions relating to song learning and behavioral neural plasticity in Zebra Finches. Titles of projects done in conjunction with Essel funded student researchers are listed in Appendix II.

Betty Zimmerberg

Dr. Zimmerberg spent the first semester of this year working at the internationally acclaimed center for Neuroscience at the University of Cagliari in Cagliari, Italy on sabbatical leave. There, she examined how maternal separation affects the protein subunits of the GABA receptor in the neurosteroid allopregnanolone. This research will hopefully allow us to better understand the neural mechanisms underlying behavioral responses to fearful situations and how childhood trauma could affect coping behavior. This line of research is being supported by a National Science Foundation Grant entitled "Early Experience and Neurosteroid Response to Stress." Three students worked in her lab during the summer of 2001, Abigail Davidson '03, Melody Samuels '02, and Abigail Rosenthal '02, collaborating on this important research.
When she returned in the Spring, she resumed her position as chair of the Neuroscience Program and taught Neuroscience 401, the senior seminar, and the Neuroscience section of Psychology 101, Introduction to Psychology, while continuing her research on the neurosteroid response stress early in life.
Dr. Zimmerberg has participated in a number of other projects this year, including serving as a mentor at Project Kaleidoscope Workshop entitled Undergraduate Neuroscience Education: from the enchanted loom to the World Wide Web. (Appendix III). She is also serving on the steering committee of N.E.U.R.O.N. (New England Undergraduate Research on Neuroscience), is a grant reviewer for the Behavioral Neuroscience Program at the National Science Foundation, served on the editorial board of Developmental Biology, and has reviewed manuscripts for various Neuroscience journals.


Dr. Steve Zottoli

Dr. Z., as he is known by his students, taught a Biology senior seminar on Plasticity in the Nervous system in the Fall and Animal Physiology in the spring. Two students worked on honors theses in his lab, Jennifer Neirman '02 and Nick Hiza '02, both of which were participants in the Woods Hole summer research laboratory program. He has also served as Director of the Howard Hughes Medical Institute grant to Williams, the chair of he Institutional Animal Care and Use committee and was the chair of the Neuroscience Program in the fall of 2001. He continued serving as the President of the Grass Foundation, a small not-for-profit foundation chartered to support research and education in Neuroscience. He is also an external advisory board member for the Biomedical Research Infrastructure Network (BRIN) program of New Mexico.


APPENDIX V: OUTSIDE SOURCES OF FUNDING

Paul Solomon

12/00-12/02- Phase II, 12 Week, Randomized, Double-Blind, Placebo-Controlled, Multicenter Study Evaluating the Safety and Efficacy of Three Fixed Doses of Oral CP-457, 920 (30MG QD, 60 MG BID and 120 MD BID) and donpezil in Outpatients with AD. Pfizer Global Research.

4/01-4/02- A Well-Controlled Safety and Efficacy Study of FK-960 in Subjects with Mild to Moderate AD. Fujisawa Research Institute of America, inc.

4/01-4/02- A Placebo-Controlled Dose Titration Efficacy and Tolerability Study of Neotrofin in Patient with Probable AD. NeoTherapeutics Inc.

4/01- 12/02- A Randomized Double-Blind, Placebo-Controlled Trial to Evaluate the Safety and Efficacy of Divalproex Sodium Therapy for Agitation in Nursing Home Residents with Probable or Possible AD.

Betty Zimmerberg

9/15/00- 8/31/02. Early Experience and Neurosteroid Response to Stress: A Behavioral Neuroscience Laboratory Enhancement Project. Research grant from the National Science Foundation. $74,906

1/97-5/31/01. Multimedia Neuroscience Education. Development of Undergraduate Education grant from the National Science Foundation. $228,9876


APPENDIX VI: ESSEL-SPONSERED COLLOQUIUM SPEAKERS

October 19th, 2001
Andrew H. Bass
Professor, Department of Neuroscience and Behavior
Cornell University, Ithaca, NY
"Singing fish: Blending the sexes from brains to behavior"

November 16th, 2001
John E. Dowling
Harvard College and Llura and Gordon Gund Professor of Neurosciences
Harvard University, Cambridge, MA
"Fishing for Genes"

March 7th, 2002
Ofer Tchernichovski
Associate Professor, Department of Biology
The City College of CUNY, New York, NY
"Dynamics of the Vocal Imitation Process: How a Zebra Finch Learns Its Song"

April 10th, 2002
Anne Etgan
Professor, Department of Neuroscience
Albert Einstein College of Medicine, Bronx, NY
"Can Estrogen Protect the Brain from Ischemia-induced Cell Death?"

May 1st, 2002
Joe Fetcho
Professor, Department of Neurobiology & Behavior
SUNY Stony Brook, Stony Brook, NY
"Seeing is Believing: Optical and Genetic Approaches Toward Understanding Neuronal Circuits in Zebrafish."


APPENDIX VIII: UPPER LEVEL NEUROSCIENCE CLASSES AND EMPIRICAL PROJECTS

PSYC 315 - Hormones & Behavior- Noah Sandstrom

The primary goal of this class is to understand they mechanisms by which hormones act on behavior and what the different physiological and behavioral effects various hormones produce, in addition to seeing how our behavior can influence how the body regulates hormone production and secretion. Specific topics that are examined include: sexual differentiation; courtship, reproduction and parental behavior; aggression; and learning and memory. Students are required to design and execute an empirical project as a part of this course. Some projects done by students included a study of hormonal influences on partner preferences, hormonal modulation of spatial learning and memory, the effects of stress hormones on feeding behavior and motivation for food, and acute effects of arousal on androgen levels in humans. In addition, students attended the annual symposium of the Center for Neuroendocrine Studies at the University of Massachusetts at Amherst. This was the third year the class attended this symposium and, as usual, it was an excellent experience. The speakers were exceptional and the students became actively engaged in discussing posters with presenters.


PSYC 316T - Clinical Neuroscience- Paul Solomon

This tutorial focused enabled students to learn techniques for diagnosing and treating neurological diseases such as Alzheimer's, Parkison's and Huntington's diseases. The course sought to provide an in-depth analysis of the relationship between brain dysfunction and disease state, providing students with the opportunity to see how recent advances in Neuroscience have had a profound impact on the understanding of diseases that affect cognition, behavior, and emotion. Diagnosis, treatment strategies, as well as social and ethical issues of each disease were considered. The course is taught in the tutorial format and provides students with the opportunity to present material based upon: (1) review of published literature, (2) analysis of case histories, and (3) observations of diagnosis and treatment of patients both live and on videotape. At the conclusion of the course, students were given actual case folders of patients from the Memory Clinic in Bennington and asked to make a diagnosis and devise a treatment plan for each case based on all they had learned.


NSCI 401- Topics in Neuroscience- Betty Zimmerberg

Neuroscientists explore issues inherent in the study of brain and behavior. The overall objective of this seminar is to create a culminating senior experience in which previous course work in specific areas in the Neuroscience Program can be brought to bear in a synthetic, interdisciplinary approach to understanding complex problems. The specific goals for students in this seminar are (1) to evaluate original research and critically examine the experimental evidence for theoretical issues, and (2) to gain an understanding of this discipline through group work, and oral presentations. The course emphasized an integrative approach, asking students to consider topics from a range of perspectives including molecular, cellular, systems, behavioral and clinical neuroscience. Previous topics have included memory, autism, depression, alcoholism, language development, and stress. This year, the course was set up so that each student was assigned to lead a discussion for one of four levels, clinical, systems, cellular or molecular, of each topic (both leaders and topics varied weekly). This included finding appropriate, recent articles of interest in that topic and presenting them to the rest of the group also assigned to that level for that topic. Then, an individual from each of the four levels met in one interdisciplinary group ( clinical, system, cellular and molecular student) to discuss the relationship and the 'bigger picture' of the topic. Ultimately, each interdisciplinary group devised and proposed an empirical study for the topic based on what they had discussed. The final project for the class was a grant proposal. This required each student to devise an original empirical idea and write a grant proposal conforming to National Institute of Health grant guidelines.


BIOL 204- Animal Behavior- Heather Williams

The first part of this course focused on how descriptive studies provide the basis for formulating questions about behavior as well as the statistical methods used to evaluate the answers to these questions. Then students were asked to consider the behavior of individuals, both as it is mediated by biological mechanisms and as it appears from an evolutionary perspective. The second half of the course was primarily concerned with the behaviors of groups of animals from a wide variety of vertebrate and invertebrate species. Stimuli, responses, and internal mechanisms that maintain social systems as well as the selection pressures that drive animals toward a particular social system were the primary focus throughout. The lab portion of the class included field research such as observing, squirrels and red winged blackbirds around campus, a trip to the Millbrooke (NY) zoo, and a final empirical lab. For this portion, students were asked to further develop one of the previous labs and do a full lab write-up of the results.


BIOL 411- Plasticity in the Nervous System- Dr. Zottoli

The ability to respond to environmental stimuli and to adapt to change is fundamental to all aspects of higher cognitive function. Processes as diverse as learning and memory, the development of alternative neuronal pathways during recovery from trauma, the acquisition of pharmacological tolerance and the recognition of olfactory cues in maternal/newborn bonding all depend upon such neuronal plasticity. This course considered a variety of short-term and long-term plastic phenomena in the nervous system, focusing on the underlying cellular and molecular mechanisms. Specific topics included plasticity of synaptic function (e.g., LTP in the hippocampus and its possible relevance to memory, cellular correlates of habituation and sensitization in Aplysia), plasticity during development (neurite outgrowth, plasticity of neuronal phenotype, the acquisition of excitability) and plasticity under various pathological conditions (kindling and epilepsy, drug addiction, response to injury). Though there was no empirical project, the small size of the class (approximately 6) and the difficulty of the papers enabled students to become extremely immersed in the topics.


BIOL 303- Sensory Biology (new, 2001) - Heather Williams

This course examined the molecular and cellular bases of the transduction and encoding of physical phenomena such as light, sound, and chemicals in a variety of organisms, including plants and invertebrates. Such questions as "What properties of the physical world are sensed (and which ones are ignored)?", "What mechanisms are used to convert physical or chemical energy into a changed biological state within a cell?", "What are the consequences of this changed state?", "How are differences in the attributes of one modality in the physical world represented by differences in molecular and cellular processes?" were considered. Some examples that were coverened included; a comparison of visual structures and pigments in bacteria, plants, arthropods, molluscs, and primates; sound transduction and its musical consequences; and the olfactory system of mammals-which is able to produce a large variety of receptors specific to an individual's experience. For a more comprehensive description of this new class, the syllubus is attached.

Biology 303 - Sensory Biology - Fall 2001

Lectures: Bronfman 107 Instructor: H. Williams
Labs: various locations hwilliams@williams.edu
Office: TBL 020 ext. 3315

Course Schedule: Topics and Readings

Topics Readings Dates

I. Introduction: principles, psychophysics, and coding Kandel ch. 21 Sept 7

II. Mechanoreception Sept 11-20

Bacterial membrane receptors Smith ch. 5
Touch Kandel ch. 22; Smith ch. 7 pp. 76-80; Herman, Duggan et al.
Proprioception Smith ch. 6

III. Hearing Sept 25-Oct 9

Insect hearing: a special case of touch? Eberl et al.
Hair Cells Kandel ch. 31
Sound
Using Hair Cells Smith ch. 8
Hair Cell Motility - implications for processing Holley; Zheng et al.

IV. Chemosensation Oct 11-30

Taste receptors and processing Smith ch. 12; Kandel ch. 32 pp. 636-642; Adler et al., Chandrashekar et al.
Vertebrate olfactory receptors Smith ch. 13, pp. 177-180; Kandel ch. 32, pp. 635-636; Buck & Axel
Genomics of olfactory receptors Glusman et al.
Organization of olfactory information Dulac & Axel; Ressler et al.; Mombaerts et al.
Olfaction in Manduca Rogers et al.; King et al.; Robertson et al.

V. Sensing light Smith pp. 195-202 Nov 1-20

Rhodopsin Rodieck, pp. 188-193; Kandel ch. 26, pp. 507-517
Invertebrate eyes Smith ch. 8
Non-standard colors Marshall & Oberwinkler; Cronin et al.; Yokoyama et al.
Color vision in humans Kandel ch. 29
Retinal processing Kandel ch. 26, pp. 517-21; Dowling & Dubin

VI. Special senses and other systems (student presentations) Nov 29-Dec 6

some possible topics are:
Pain
Electroreception
Magnetic sense
(and there are many other possibilities)

Reading list

Books from which chapters were drawn:

Kandel, E.R., Schwartz, J.H., Jessell, T.M. (2000) Principles of Neural Science, 4th Edition. McGraw-Hill.
Rodieck, R.W. (1998) The First Steps in Seeing. Sinauer.
Smith, C.U.M. (2000) Biology of Sensory Systems. John Wiley and Sons.

Papers from the literature:

Adler, E., Hoon, M.A., Mueller, K.L., Chandrashekar, J., Ryba, N.J.P., and Zuker, C.S. (2000) A novel family of mammalian taste receptors. Cell, 100:693-702.
Buck, L., and Axel, R. (1981) A novel multigene family may encode odorant receptors: A molecular basis for odor recognition. Cell, 65:175-187.
Chandrashekar, J., Mueller, K.L., Hoon, M.A., Adler, E., Feng, L., Guo, W., Zuker, C.S., and Ryba, N.J.P. (2000) T2Rs function as bitter taste receptors. Cell, 100:703-711.
Cronin, T.W., Caldwell, R.L, and Marshall, J. (2001) Tunable color vision in a mantis shrimp. Nature, 411:547-8.
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Important dates

Oct 1 Monday Mechanosensation problem(s) due
Oct 17 Wednesday Hearing problem(s) due
Nov 5 Monday Chemosensation problem(s) due
Nov. 1 Friday Outline for paper/presentation due
Nov. 20 Tuesday Research prospectus due
Dec. 3 Monday Vision problem(s) due
Dec. 11 Tuesday Paper due


Sensory Biology Laboratory

The Sensory Biology course will include 5-6 weeks of laboratory exercises and activities, scheduled as follows:

Dates Location Topic

Sept. 26-27 TBL 104 Psychophysics
Oct. 10-11 MSL 130 Stretch Receptor
Oct. 24-25 MSL 130 Retinal Potentials
Nov. 7-8 TBL 104 Crayfish Visual Pigments
Nov. 14-15 TBL 104 Crayfish pigments - continued
Nov. 28-29 TBL 104 Sensory Illusions

Two of the labs (psychophysics and sensory illusions) will investigate sensory phenomena by examining human responses to a variety of stimuli; the other three will use crayfish as the experimental system. The crayfish system is a well-established invertebrate model for many aspects of sensation and neurobiology.

Psychophysics
We will investigate brightness, loudness, and touch sensitivity, comparing the Weber/Fechner/Stevens relationships for these three modalities.

Stretch Receptor
Using the crayfish stretch receptor, we will examine the characteristics of the kinesthetic sense as well as coding and adaptation.

Retinal Potentials
The crayfish compound eye has many interesting characteristics, including a hormonally controlled system for regulating visual sensitivity. We will record the electroretinogram and investigate the influence of an octapeptide on the response to light.

Crayfish Visual Pigments
Although many visual pigments have been characterized, crayfish rhodopsin has not. We will attempt to clone the crayfish visual pigment, sequence it, and characterize the structural aspects that have implications for vision.

Sensory Illusions
We will replicate sensory illusions described in the literature for taste, smell, kinesthesia, and vision. The lab will focus upon a) characterizing the effectiveness of the illusion and b) the relationship between the stimulus that is received and its transformation into an inaccurate representation of within the organism.

Evaluation

Problem sets: 60 % (15% for each of four problem sets, one following each major topic)
Paper and presentation: 25 %
Research prospectus: 15 %

Class Participation

Quality and quantity (but not straight quantity) of class participation will be the determining factor in assigning a grade that falls between two categories. If your final grade lies on the line between a B+ and an A-, and you have been an active and positive contributor to class discussion, you will find yourself with an A-. Otherwise, it will be a B+.

Problem sets

At the conclusion of each of the four major topics, you will be given a problem set calling for short essay answers over a weekend. As noted above, these problem sets are open book/open notes, but cannot be discussed with others. I will be expected clearly written, cohesive answers. Although problems may include information we have not covered in class or in readings, all of the information needed to answer the problems will be present in materials from the class. The answer to any single problem should not exceed one page; depending upon the topic, there may be up to 5 problems (larger numbers of problems will mean that shorter answers are expected).

Paper and Presentation

A short paper and presentation on a topic of your choice, consisting of a synthesis of material from the original literature, will make up 25% of the final grade. An outline of the paper, along with a preliminary reference list, is due on Friday Nov. 1. I will go over this outline and return it to you, with suggestions, soon thereafter. You will then research the topic of your choice, give a presentation to the class during the final two weeks of class, and hand in a 5-7 page paper on the last day of reading period (the class has no final exam).

What is the audience for this paper/presentation?

The readers for whom you should write are your classmates. To be sure, the instructor will read the final version and others may read a draft, but the paper should be written for a fellow student. Assume that the reader has acquired knowledge about the material we’ve covered in class.

Choosing a topic

The choice of a topic is up to you; for suggestions, ideas, or a place to start:
• Use PubMed to search for papers related to particular key words or topics. The URL is:
http://www.ncbi.nlm.nih.gov/PubMed/)
• Browse through abstracts or the table of contents of recent (the last year or two) issues of journals dealing with fields of interest to you.
• Look at reference lists in books on particular sensory systems, or in books relating to special senses (some of these are on reserve in the library).
• You may also wish to search the World Wide Web, which can provide you with lists of papers and resources - but be warned that information on the internet is extremely variable in quality, and needs to be pursued further by finding a primary source.

Your paper and presentation should reflect critical evaluation of your topic, which should be reasonably restricted, should not regurgitate the pre-digested views found in books (which are good for laying the groundwork and making sure you understand the background), and should be use a synthetic approach or lay out a theoretical framework about the topic you choose. Although you may skim a number papers in the original literature in finding your topic and focusing in upon it, a good paper need cite no more than 7 or so journal articles central to its topic. if you find yourself needing many more, you have not focused your topic properly. IMPORTANT: The papers you cite in your list of references should be from refereed scientific journals, and not from the internet.

One reason that it is to your advantage to start work on your paper/presentation early is that you can request journal articles that we don't have via inter-library loan. This is most easily done on-line, using “forms” option on the library’s web page (http://www.williams.edu/library/forms/illphoto.html).

The presentation

You will present your topic to the class during the last two weeks of the course (the precise schedule will be determined later). The presentation should last about 15-20 minutes, and you should plan to present the class with a handout that gives the outline of your topic and any important figures that it would be hard to reproduce in notes, as well as some selected references. You should plan to do some board work and also present some important figures (you can reproduce them from journal articles or books if you let us know who originally produced them) as overheads (unfortunately, we do not have an AV classroom). Your presentation should be planned to get across some serious content in a manner that engages your listeners - ideally, they should have questions!

The paper

The paper should not exceed 7 pages (no tiny fonts, please), and may cover much of the same ground as your presentation (you may also want to add material to cover any questions that came up during the presentation). You may want to use the background information from books in writing the introduction to the paper, but the body of the paper should explain the topic you've focused upon, why it is of interest, what's known about it, the views taken by different researchers, and conclude with your synthesis, a new hypothesis, or a well-designed experiment that bears upon the problem, and the implications of your thinking on a more general level.

Write clearly and concisely, do not use the passive voice or first person unless absolutely necessary. Avoid using words suggested by the thesaurus unless you are absolutely sure you understand how they change the nuances of what you're saying.

Research prospectus

There will be no formal lab reports for this course. Instead, you will be expected to generate a prospectus for a research project that builds upon one of the issues we cover in lab. You will be expected to provide 1) a short introduction, including a statement about the background and importance of the experiment(s) you propose, 2) the specific aims of the experiment(s), 3) an overview of the methods you would use, 4) the possible outcomes of the experiment(s) and their interpretation, and 5) references. This research prospectus should not exceed 5 pages and is due before you leave for Thanksgiving.

Honor Code

The honor code as laid out in the Student Handbook applies to all written work in this course. For specific types of assignments, further guidelines are as follows:

Problems: Open-book, open-notes - but do not consult any individuals or discuss the problems with others.

Paper/presentation: You are welcome and encouraged to solicit feedback from others during the writing of the paper. However, the words that go on the pages and into the presentation must be your own, and not derived from written materials or from other individuals. All materials should be properly referenced (if you have doubts about how to do so, see the instructor).

Research prospectus: You are encouraged to consult with others in devising the research problem and approach you will present. However, the work you hand in must be your own.

 


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